Hawking, S. W.
(1988) A Brief History of Time: From the Big Bang to Black Holes. London: Bantam.Hawking, S. W.,
and L. Mlodinow. (2010) The Grand Design. London: Bantam.Hazkani-Covo, E., R. M. Zeller,
and W. Martin. (2010) Molecular Poltergeists: Mitochondrial DNA Copies (Numts) in Sequenced Nuclear Genomes. PLoS Genet 6: e1000834.Hilario, E.,
and J. P. Gogarten. (1993) Horizontal Transfer of Atpase Genes — the Tree of Life Becomes a Net of Life. Biosystems 31: 111–119.Hochstrasser, M.
(2009) Origin and Function of Ubiquitin-Like Proteins. Nature 458: 422–429.Hollick, J. B.
(2010) Paramutation and Development. Annu Rev Cell Dev Biol 26: 557–579. Holmes, E. C. (2009) The Evolution and Emergence of RNA Viruses. Oxford: Oxford University Press.Horie, M., T. Honda, Y. Suzuki, Y. Kobayashi, T. Daito, T. Oshida, K. Ikuta, P. Jern, T. Gojobori, J. M. Coffin,
and K. Tomonaga. (2010) Endogenous Non-Retroviral RNA Virus Elements in Mammalian Genomes. Nature 463: 84–87.Huber, C., W. Eisenreich, S. Hecht,
and G. Wachtershauser. (2003) A Possible Primordial Peptide Cycle. Science 301: 938–940.Hudder, A., L. Nathanson,
and M. P. Deutscher. (2003) Organization of Mammalian Cytoplasm. Mol Cell Biol 23: 9,318—93,26.Hulen, C.,
and J. Legault-Demare. (1975) In Vitro Synthesis of Large Peptide Molecules Using Glucosylated Single-Stranded Bacteriophage T4d DNA Template. Nucleic Acids Res 2: 2,037—2,048.Humbard, M. A., H. V. Miranda, J. M. Lim, D. J. Krause, J. R. Pritz, G. Zhou, S. Chen, L. Wells,
and J. A. Maupin-Furlow. (2010) Ubiquitin-Like Small Archaeal Modifier Proteins (Samps) in Haloferax Volcanii. Nature 463: 54–60.Hurst, L. D.
(2002) The Ka/Ks Ratio: Diagnosing the Form of Sequence Evolution. Trends Genet 18: 486.Hurst, L. D.,
and N. G. Smith. (1999) Do Essential Genes Evolve Slowly? Curr Biol 9: 747–750.Hussain, T., V. Kamarthapu, S. P. Kruparani, M. V. Deshmukh,
and R. Sankaranarayanan. (2010) Mechanistic Insights into Cognate Substrate Discrimination During Proofreading in Translation. Proc Natl Acad Sci USA 107: 22,117—22,121.Huxley, J.
(2010) Evolution: The Modern Synthesis: The Definitive Edition. Cambridge: MIT Press.Huxley, T. H.
(1860) Darwin on the Origin of Species. Westminster Review: 541–570.Irimia, M., D. Penny,
and S. W. Roy. (2007) Coevolution of Genomic Intron Number and Splice Sites. Trends Genet 23: 321–325.Irimia, M., S. W. Roy, D. E. Neafsey, J. F. Abril, J. Garcia-Fernandez,
and E. V. Koonin. (2009) Complex Selection on 5’ Splice Sites in Intron-Rich Organisms. Genome Res 19: 2,021—2,027.Iwabe, N., K. Kuma, M. Hasegawa, S. Osawa,
and T. Miyata. (1989) Evolutionary Relationship of Archaebacteria, Eubacteria, and Eukaryotes Inferred from Phylogenetic Trees of Duplicated Genes. Proc Natl Acad Sci USA 86: 9,355—9,359.Iyer, L. M., A. M. Burroughs,
and L. Aravind. (2006) The Prokaryotic Antecedents of the Ubiquitin-Signaling System and the Early Evolution of Ubiquitin-Like Beta-Grasp Domains. Genome Biol 7: R60.Iyer, L. M., E. V. Koonin,
and L. Aravind. (2003) Evolutionary Connection Between the Catalytic Subunits of DNA-Dependent RNA Polymerases and Eukaryotic RNA-Dependent RNA Polymerases and the Origin of RNA Polymerases. BMC Struct Biol 3: 1.Iyer, L. M., E. V. Koonin,
and L. Aravind. (2004a) Evolution of Bacterial RNA Polymerase: Implications for Large-Scale Bacterial Phylogeny, Domain Accretion, and Horizontal Gene Transfer. Gene 335: 73–88.Iyer, L. M., E. V. Koonin, D. D. Leipe,
and L. Aravind. (2005) Origin and Evolution of the Archaeo-Eukaryotic Primase Superfamily and Related Palm-Domain Proteins: Structural Insights and New Members. Nucleic Acids Res 33: 3,875—3,896.